diff --git a/packages/nest/package.py b/packages/nest/package.py new file mode 100644 index 0000000000000000000000000000000000000000..323b91110a5abe7adb8e48186317fb4cae420684 --- /dev/null +++ b/packages/nest/package.py @@ -0,0 +1,155 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Nest(CMakePackage): + """NEST is a simulator for spiking neural network models + It focuses on the dynamics, size and structure of neural systems rather + than on the exact morphology of individual neurons.""" + + homepage = "http://www.nest-simulator.org" + url = "https://github.com/nest/nest-simulator/archive/refs/tags/v2.20.0.tar.gz" + git = "https://github.com/nest/nest-simulator.git" + + version('master', branch='master') + version('2.20.0', sha256='40e33187c22d6e843d80095b221fa7fd5ebe4dbc0116765a91fc5c425dd0eca4') + version('2.14.0', sha256='d6316d6c9153100a3220488abfa738958c4b65bf2622bd15540e4aa81e79f17f') + version('2.12.0', sha256='bac578f38bb0621618ee9d5f2f1febfee60cddc000ff32e51a5f5470bb3df40d') + version('2.10.0', sha256='2b6fc562cd6362e812d94bb742562a5a685fb1c7e08403765dbe123d59b0996c') + version('2.8.0', sha256='d47325b27a5599b6ea58a3c4ef06656e7c5a4941c4e94dec6a5c2fa956209915') + version('2.6.0', sha256='5fe4924bc57d0c7dd820aa371de935eedf7e813832c0eee2c976b33c9a8db4cf') + version('2.4.2', sha256='8f86e58c1a12b733ffabd8b0400326e5a3494a458149ea8ebe9f19674d05b91b') + + maintainers = ['ikitayama'] + + variant('python', default=False, + description='Build the PyNest interface') + variant('mpi', default=False, + description='Build with MPI bindings') + variant('openmp', default=True, + description='"Enable OpenMP support"') + variant('optimize', default=True, + description='Build with MPI bindings') + variant('modules', default=False, + description='Enables external module support') + variant('gsl', default=True, + description="Enable GNU Scientific Library") + variant('shared', default=True, + description="Build shared libraries") + # TODO add variants for neurosim and music when these are in spack + + conflicts('~gsl', when='@:2.10.99', + msg='Option only introduced for non-ancient versions.') + conflicts('~shared', when='@:2.10.99', + msg='Option only introduced for non-ancient versions.') + conflicts('~openmp', when='@:2.10.99', + msg='Option only introduced for non-ancient versions.') + + depends_on('python@2.6:', when='+python', type=('build', 'run')) + depends_on('py-numpy', when='+python', type=('build', 'run')) + depends_on('py-scipy', when='+python', type=('run')) + depends_on('py-cython@0.19.2:', when='+python', type='build') + depends_on('py-nose', when='+python', type='test') + depends_on('py-setuptools', when='+python', type='build') + + depends_on('mpi', when='+mpi') + + depends_on('doxygen', type='build') + + depends_on('gsl', when='+gsl') + depends_on('readline') + depends_on('libtool') + depends_on('pkgconfig', type='build') + + extends('python', when='+python') + + # Before 2.12.0 it was an autotools package + @when('@:2.10.99') + def cmake(self, spec, prefix): + pass + + @when('@:2.10.99') + def build(self, spec, prefix): + pass + + @when('@:2.10.99') + def install(self, spec, prefix): + configure_args = ["CXXFLAGS=-std=c++03", + "--prefix=" + prefix, + "--with-openmp"] + if '+python' in spec: + configure_args.append("--with-python") + else: + configure_args.append("--without-python") + if '+mpi' in spec: + configure_args.append("--with-mpi") + else: + configure_args.append("--without-mpi") + if '+optimize' in spec: + configure_args.append("--with-optimize") + else: + configure_args.append("--without-optimize") + + configure(*configure_args) + + make() + make("install") + + def cmake_args(self): + args = [] + + if '+mpi' in self.spec: + args.append('-Dwith-mpi=ON') + else: + args.append('-Dwith-mpi=OFF') + + if '+python' in self.spec: + args.append('-Dwith-python=ON') + args.append('-Dcythonize-pynest=' + self.spec['py-cython'].prefix) + else: + args.append('-Dwith-python=OFF') + args.append('-Dcythonize-pynest=OFF') + + if '+optimize' in self.spec: + args.append('-Dwith-optimize=ON') + else: + args.append('-Dwith-optimize=OFF') + + if '+gsl' in self.spec: + args.append('-Dwith-gsl=' + self.spec['gsl'].prefix) + else: + args.append('-Dwith-gsl=OFF') + + if '+openmp' in self.spec: + args.append('-Dwith-openmp=ON') + else: + args.append('-Dwith-openmp=OFF') + + if '+shared' in self.spec: + args.append('-Dstatic-libraries=OFF') + else: + args.append('-Dstatic-libraries=ON') + + return args + + @when('@:2.14.0+modules') + @run_after('install') + def install_headers(self): + # copy source files to installation folder for older versions + # (these are needed for modules to build against) + # see https://github.com/nest/nest-simulator/pull/844 + path_headers = join_path(prefix, "include", "nest") + + mkdirp(path_headers) + + for suffix in ["h", "hpp"]: + for f in find_headers('*.{0}'.format(suffix), + self.stage.source_path, recursive=True): + install(f, path_headers) + + def setup_run_environment(self, env): + env.set("NEST_INSTALL_DIR", self.spec.prefix)