From bc4f892a281c50beb6c1d6a5f69a8609bf98b9e3 Mon Sep 17 00:00:00 2001 From: Didi Hou <didi.hou@rwth-aachen.de> Date: Wed, 20 Sep 2023 15:51:30 +0200 Subject: [PATCH] Update VERSION_LOG.md --- VERSION_LOG.md | 20 ++++++++++++++++---- 1 file changed, 16 insertions(+), 4 deletions(-) diff --git a/VERSION_LOG.md b/VERSION_LOG.md index e838285..27f20fa 100644 --- a/VERSION_LOG.md +++ b/VERSION_LOG.md @@ -1,16 +1,28 @@ -# This is the log file recording the changes made for every release of versions of mulit-area model. - - ## MAM 1.1.0 ### Updates +* imporved the notebook structure of multi-area-model.ipynb +* added ### Bug fixes +* corrected the separator from "" to "/" in ./multiarea_model/data_multiarea/SLN_logdensities.R to fix the file path of ./multiarea_model/data_multiarea/bbAlt.R ## MAM 1.0.0 -MAM 1.0.0 is the first release of the multi-area model, which has been documented and in line with the relevant publications. +This code implements the spiking network model of macaque visual cortex developed at the Institute of Neuroscience and Medicine (INM-6), Research Center Jülich. + +The model has been documented in the following publications: + +1. Schmidt M, Bakker R, Hilgetag CC, Diesmann M & van Albada SJ Multi-scale account of the network structure of macaque visual cortex Brain Structure and Function (2018), 223: 1409 https://doi.org/10.1007/s00429-017-1554-4 + +2. Schuecker J, Schmidt M, van Albada SJ, Diesmann M & Helias M (2017) Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome. PLOS Computational Biology, 13(2): e1005179. https://doi.org/10.1371/journal.pcbi.1005179 + +3. Schmidt M, Bakker R, Shen K, Bezgin B, Diesmann M & van Albada SJ (2018) A multi-scale layer-resolved spiking network model of resting-state dynamics in macaque cortex. PLOS Computational Biology, 14(9): e1006359. https://doi.org/10.1371/journal.pcbi.1006359 + +The code in this repository is self-contained and allows one to reproduce the results of all three papers. + +The code was improved since the above publications to function with more modern versions of NEST (3+) as well as other minor updates. ### Bug fixes * corrected the url of NEST logo in README.md -- GitLab