diff --git a/figures/Schmidt2017/Fig8_laminar_paths.eps b/figures/Schmidt2017/Fig8_laminar_paths.eps index 0e95e2e639b24b590c7c13b56ea409524816b403..121dc2e431835caf63bc1e8cab1cb76755491062 100644 --- a/figures/Schmidt2017/Fig8_laminar_paths.eps +++ b/figures/Schmidt2017/Fig8_laminar_paths.eps @@ -2,7 +2,7 @@ %%BoundingBox: -1 -1 492 377 %%HiResBoundingBox: -1 -1 491.394 376.241 %%Creator: PyX 0.14.1 -%%CreationDate: Wed Mar 21 11:29:28 2018 +%%CreationDate: Thu Mar 29 10:27:39 2018 %%EndComments %%BeginProlog %%BeginResource: BeginEPSF @@ -1524,7 +1524,7 @@ W [0.298 0.4471 0.6902] sc /DeviceRGB {} cs [0.298 0.4471 0.6902] sc -20.850127 65.394 20.177541 28.532903 re +20.850127 65.394 20.177541 43.250233 re f Q q @@ -1534,7 +1534,7 @@ W [0.298 0.4471 0.6902] sc /DeviceRGB {} cs [0.298 0.4471 0.6902] sc -46.072054 65.394 20.177542 28.532903 re +46.072054 65.394 20.177542 45.36 re f Q q @@ -1544,7 +1544,11 @@ W [0.298 0.4471 0.6902] sc /DeviceRGB {} cs [0.298 0.4471 0.6902] sc -71.293981 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1417.32 1050.23 m diff --git a/figures/Schmidt2017/Fig8_laminar_paths.py b/figures/Schmidt2017/Fig8_laminar_paths.py index f285db45c8713d9f39d8c553ee41d0f01e494638..6199ec28dfe24143861ced814b245412a3afed82 100644 --- a/figures/Schmidt2017/Fig8_laminar_paths.py +++ b/figures/Schmidt2017/Fig8_laminar_paths.py @@ -28,7 +28,7 @@ SLN_completed = proc['SLN_completed'] SLN_Data_FV91 = proc['SLN_Data_FV91'] arch_types = proc['architecture_completed'] -par = {'g': -4.} +par = {'connection_params': {'g': -4.}} M = MultiAreaModel(par, theory=True, simulation=False) gain_matrix = M.K_matrix[:, :-1] * np.absolute(M.J_matrix[:, :-1]) @@ -176,7 +176,7 @@ for target_area in area_list: source_areas=[source_area], complete_area_list=area_list, external=False) - pM = path_length_matrix[indices] + pM = path_length_matrix[indices[:, :-1]] pM = pM.reshape( (len(M.structure[target_area]), len(M.structure[source_area]))) imin = np.unravel_index(np.argmin(pM), pM.shape)