From 82cc6718d2562a4194fb5a7de70da3aef379f5b6 Mon Sep 17 00:00:00 2001 From: Maximilian Schmidt <max.schmidt@fz-juelich.de> Date: Fri, 30 Mar 2018 17:25:30 +0900 Subject: [PATCH] Add note on SLN fit --- README.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index 9fb1219..07161e2 100644 --- a/README.md +++ b/README.md @@ -38,9 +38,9 @@ To start using the framework, the user has to define a few environment variables in a new file called `config.py`. The file `config_template.py` lists the required environment variables that need to specified by the user. -Furthermore, please add the path to the `multiarea_model` subfolder to your PYTHONPATH: +Furthermore, please add the path to the repository to your PYTHONPATH: -`export PYTHONPATH=/path/to/repository/multiarea_model/:$PYTHONPATH`. +`export PYTHONPATH=/path/to/repository/:$PYTHONPATH`. -------------------------------------------------------------------------------- @@ -185,7 +185,7 @@ In addition, reproducing the figures of [1] requires networkx, python-igraph and In addition, Figure 7 of [1] requires installing the `infomap` package to perform the map equation clustering. See <http://www.mapequation.org/code.html> for all necessary information. -The SLN fit in `multiarea_model/data_multiarea/VisualCortex_Data.py` and `figures/Schmidt2018/Fig5_cc_laminar_pattern.py` requires an installation of R and the R library `aod` (<http://cran.r-project.org/package=aod>). Without R installation, both scripts will directly use the resulting values of the fit (see Fig. 5 of [1]). +The SLN fit in `multiarea_model/data_multiarea/VisualCortex_Data.py` and `figures/Schmidt2018/Fig5_cc_laminar_pattern.py` is currently not possible because of copyright issues. ## Contributors -- GitLab