From 22146f157db4ddaac2ba13325162e16c66a3092a Mon Sep 17 00:00:00 2001
From: Didi Hou <d.hou@outlook.com>
Date: Fri, 1 Sep 2023 10:41:13 +0200
Subject: [PATCH] update MAM2EBRAINS.py and multi-area-model.ipynb

---
 figures/MAM2EBRAINS.py | 7 +++++--
 multi-area-model.ipynb | 2 +-
 2 files changed, 6 insertions(+), 3 deletions(-)

diff --git a/figures/MAM2EBRAINS.py b/figures/MAM2EBRAINS.py
index 4c4b440..ce9208f 100644
--- a/figures/MAM2EBRAINS.py
+++ b/figures/MAM2EBRAINS.py
@@ -11,10 +11,13 @@ from matplotlib import gridspec
 from matplotlib import rc_file
 rc_file('plotstyle.rc')
 
+icolor = myred
+ecolor = myblue
+
 # Instantaneous and mean firing rate across all populations
 
-def plot_instan_mean_firing _rate(tsteps, rate):
-    fig, ax = plt.subplots()
+def plot_instan_mean_firing_rate(tsteps, rate, sim_params):
+    fig, ax = pl.subplots()
     ax.plot(tsteps, rate)
     ax.plot(tsteps, np.average(rate)*np.ones(len(tsteps)), label='mean')
     ax.set_title('Instantaneous and mean firing rate across all populations')
diff --git a/multi-area-model.ipynb b/multi-area-model.ipynb
index c0b1814..b38965b 100644
--- a/multi-area-model.ipynb
+++ b/multi-area-model.ipynb
@@ -1113,7 +1113,7 @@
     }
    ],
    "source": [
-    "M2E.plot_instan_mean_firing _rate(tsteps, rate)"
+    "M2E.plot_instan_mean_firing _rate(tsteps, rate, sim_params)"
    ]
   },
   {
-- 
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